[INFO] cloning repository https://github.com/fg-labs/mako
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/fg-labs/mako" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fmako", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fmako'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] c3ddc8997fccb909ad2f363be9d4b02cde13fbbc
[INFO] checking fg-labs/mako against master#c290daa1e5274a52e54a0f49e31bd70192abc606 for pr-133502-23
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fmako" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-7-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-7-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/fg-labs/mako
[INFO] finished tweaking git repo https://github.com/fg-labs/mako
[INFO] tweaked toml for git repo https://github.com/fg-labs/mako written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/fg-labs/mako on toolchain c290daa1e5274a52e54a0f49e31bd70192abc606
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/fg-labs/mako already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-core v0.19.0
[INFO] [stderr]   Downloaded noodles v0.106.0
[INFO] [stderr]   Downloaded noodles-csi v0.54.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.46.0
[INFO] [stderr]   Downloaded noodles-sam v0.82.0
[INFO] [stderr]   Downloaded noodles-core v0.20.0
[INFO] [stderr]   Downloaded bgzf v0.3.0
[INFO] [stderr]   Downloaded read-structure v0.2.0
[INFO] [stderr]   Downloaded mimalloc v0.1.52
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded libdeflater v1.25.2
[INFO] [stderr]   Downloaded noodles v0.111.0
[INFO] [stderr]   Downloaded fgoxide v0.6.0
[INFO] [stderr]   Downloaded serde-aux v4.7.0
[INFO] [stderr]   Downloaded noodles-tabix v0.62.0
[INFO] [stderr]   Downloaded bytesize v2.4.0
[INFO] [stderr]   Downloaded noodles-csi v0.56.0
[INFO] [stderr]   Downloaded mach2 v0.6.0
[INFO] [stderr]   Downloaded noodles-fasta v0.62.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.47.0
[INFO] [stderr]   Downloaded fs4 v1.1.0
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.6
[INFO] [stderr]   Downloaded crossbeam-epoch v0.9.20
[INFO] [stderr]   Downloaded cargo-lock v11.0.1
[INFO] [stderr]   Downloaded simba v0.9.1
[INFO] [stderr]   Downloaded noodles-bam v0.90.0
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-bam v0.86.0
[INFO] [stderr]   Downloaded jiff-static v0.2.28
[INFO] [stderr]   Downloaded noodles-sam v0.85.0
[INFO] [stderr]   Downloaded lexical-util v1.0.7
[INFO] [stderr]   Downloaded lexical-write-float v1.0.6
[INFO] [stderr]   Downloaded noodles-vcf v0.88.0
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] [stderr]   Downloaded lexical-parse-float v1.0.6
[INFO] [stderr]   Downloaded sysinfo v0.38.4
[INFO] [stderr]   Downloaded libdeflate-sys v1.25.2
[INFO] [stderr]   Downloaded git2 v0.21.0
[INFO] [stderr]   Downloaded nalgebra v0.33.3
[INFO] [stderr]   Downloaded libmimalloc-sys v0.1.49
[INFO] [stderr]   Downloaded jiff v0.2.28
[INFO] [stderr]   Downloaded libz-sys v1.1.29
[INFO] [stderr]   Downloaded libgit2-sys v0.18.5+1.9.4
[INFO] [stderr]   Downloaded fgumi-dna v0.3.1
[INFO] [stderr]   Downloaded fgumi-bgzf v0.3.1
[INFO] [stderr]   Downloaded fgumi-simd-fastq v0.3.1
[INFO] [stderr]   Downloaded fgumi-tag v0.3.1
[INFO] [stderr]   Downloaded fgumi-bam-io v0.3.1
[INFO] [stderr]   Downloaded fgumi-umi v0.3.1
[INFO] [stderr]   Downloaded fgumi-metrics v0.3.1
[INFO] [stderr]   Downloaded fgumi-raw-bam v0.3.1
[INFO] [stderr]   Downloaded fgumi-sam v0.3.1
[INFO] [stderr]   Downloaded fgumi-sort v0.3.1
[INFO] [stderr]   Downloaded fgumi-consensus v0.3.1
[INFO] [stderr]   Downloaded fgumi v0.3.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7
[INFO] running `Command { std: "docker" "start" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7" "/opt/rustwide/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7" "/opt/rustwide/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]     Checking bytes v1.12.0
[INFO] [stderr]     Checking zlib-rs v0.6.3
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling stable_deref_trait v1.2.1
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]     Checking bitflags v2.13.0
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking hashbrown v0.17.1
[INFO] [stderr]     Checking bit-vec v0.9.1
[INFO] [stderr]    Compiling syn v2.0.118
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling zerocopy v0.8.52
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]     Checking simd-adler32 v0.3.9
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]    Compiling getrandom v0.4.3
[INFO] [stderr]    Compiling foldhash v0.1.5
[INFO] [stderr]     Checking rand_core v0.10.1
[INFO] [stderr]    Compiling winnow v1.0.3
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling hashbrown v0.15.5
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling toml_parser v1.1.2+spec-1.1.0
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.20
[INFO] [stderr]    Compiling serde_json v1.0.150
[INFO] [stderr]     Checking once_cell v1.21.4
[INFO] [stderr]     Checking log v0.4.32
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]     Checking regex-automata v0.1.10
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking ordered-float v2.10.1
[INFO] [stderr]    Compiling nix v0.31.3
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[INFO] [stderr]    Compiling jobserver v0.1.34
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[INFO] [stderr]    Compiling cc v1.2.65
[INFO] [stderr]     Checking cpufeatures v0.3.0
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[INFO] [stderr]    Compiling syn v1.0.109
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[INFO] [stderr]     Checking noodles-bgzf v0.46.0
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]    Compiling serde_spanned v1.1.1
[INFO] [stderr]    Compiling toml_datetime v0.7.5+spec-1.1.0
[INFO] [stderr]    Compiling semver v1.0.28
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]    Compiling toml v0.9.12+spec-1.1.0
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[INFO] [stderr]     Checking crossbeam-queue v0.3.12
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[INFO] [stderr]     Checking strum v0.24.1
[INFO] [stderr]     Checking rand_distr v0.6.0
[INFO] [stderr]     Checking sysinfo v0.38.4
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking regex v1.12.4
[INFO] [stderr]     Checking num_cpus v1.17.0
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking float-cmp v0.10.0
[INFO] [stderr]     Checking lru v0.18.0
[INFO] [stderr]     Checking env_filter v1.0.1
[INFO] [stderr]     Checking fgumi-simd-fastq v0.3.1
[INFO] [stderr]    Compiling assert_cmd v2.2.2
[INFO] [stderr]     Checking predicates v3.1.4
[INFO] [stderr]     Checking wait-timeout v0.2.1
[INFO] [stderr]    Compiling libdeflate-sys v1.25.2
[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling libgit2-sys v0.18.5+1.9.4
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]     Checking noodles-core v0.20.0
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.49
[INFO] [stderr]     Checking noodles-core v0.19.0
[INFO] [stderr]     Checking noodles-csi v0.54.0
[INFO] [stderr]     Checking noodles-sam v0.82.0
[INFO] [stderr]     Checking libdeflater v1.25.2
[INFO] [stderr]     Checking noodles-bgzf v0.47.0
[INFO] [stderr]    Compiling strum_macros v0.24.3
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]     Checking noodles-csi v0.56.0
[INFO] [stderr]     Checking noodles-fasta v0.62.0
[INFO] [stderr]     Checking noodles-tabix v0.62.0
[INFO] [stderr]     Checking noodles-sam v0.85.0
[INFO] [stderr]     Checking noodles-vcf v0.88.0
[INFO] [stderr]     Checking mimalloc v0.1.52
[INFO] [stderr]     Checking noodles-bam v0.86.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]    Compiling bytemuck_derive v1.10.2
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking rand_chacha v0.3.1
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[INFO] [stderr]     Checking rand v0.8.6
[INFO] [stderr]     Checking noodles-bam v0.90.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling zerofrom v0.1.8
[INFO] [stderr]     Checking env_logger v0.11.10
[INFO] [stderr]    Compiling enum_dispatch v0.3.13
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking noodles v0.106.0
[INFO] [stderr]     Checking bytemuck v1.25.0
[INFO] [stderr]    Compiling yoke v0.8.3
[INFO] [stderr]     Checking safe_arch v1.0.0
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling zerotrie v0.2.4
[INFO] [stderr]    Compiling zerovec v0.11.6
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]     Checking wide v1.5.0
[INFO] [stderr]     Checking bgzf v0.3.0
[INFO] [stderr]     Checking fgumi-bgzf v0.3.1
[INFO] [stderr]    Compiling tinystr v0.8.3
[INFO] [stderr]    Compiling potential_utf v0.1.5
[INFO] [stderr]     Checking noodles v0.111.0
[INFO] [stderr]    Compiling icu_collections v2.2.0
[INFO] [stderr]     Checking fgumi-tag v0.3.1
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[INFO] [stderr]     Checking clap v4.6.1
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[INFO] [stderr]     Checking bstr v0.2.17
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[INFO] [stderr]     Checking serde-aux v4.7.0
[INFO] [stderr]     Checking csv v1.1.6
[INFO] [stderr]     Checking read-structure v0.2.0
[INFO] [stderr]    Compiling icu_provider v2.2.0
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]     Checking fgoxide v0.6.0
[INFO] [stderr]    Compiling icu_properties v2.2.0
[INFO] [stderr]    Compiling icu_normalizer v2.2.0
[INFO] [stderr]     Checking fgumi-raw-bam v0.3.1
[INFO] [stderr]     Checking fgumi-metrics v0.3.1
[INFO] [stderr]     Checking fgumi-sam v0.3.1
[INFO] [stderr]     Checking fgumi-bam-io v0.3.1
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]    Compiling idna_adapter v1.2.2
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]     Checking fgumi-sort v0.3.1
[INFO] [stderr]    Compiling git2 v0.21.0
[INFO] [stderr]     Checking fgumi-consensus v0.3.1
[INFO] [stderr]    Compiling url v2.5.8
[INFO] [stderr]    Compiling cargo-lock v11.0.1
[INFO] [stderr]     Checking nalgebra v0.33.3
[INFO] [stderr]    Compiling built v0.8.1
[INFO] [stderr]    Compiling fgumi v0.3.1
[INFO] [stderr]    Compiling fg-mako v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 35s
[INFO] running `Command { std: "docker" "inspect" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7", kill_on_drop: false }`
[INFO] [stdout] 5fc786be9bc45095c378844ffcdc4599bc06d1f082397b942abc9a248c7734f7
